Package Details: atsas 3.2.1-3

Git Clone URL: https://aur.archlinux.org/atsas.git (read-only, click to copy)
Package Base: atsas
Description: A program suite for small-angle scattering data analysis from biological macromolecules
Upstream URL: https://www.embl-hamburg.de/biosaxs/software.html
Licenses: custom
Submitter: awacha
Maintainer: awacha
Last Packager: awacha
Votes: 1
Popularity: 0.000989
First Submitted: 2016-11-03 12:37 (UTC)
Last Updated: 2023-12-13 16:03 (UTC)

Latest Comments

hmcezar commented on 2023-12-14 09:12 (UTC)

Weird.. tried the new build file and I still get the same problem. GDB is telling me the problem is with Qscreen (qt6-base - see below). I'm on Manjaro Gnome, but the version of qt6-base is the same on Manjaro and Arch. Do you have any suggestions?

Thread 1 "primus" received signal SIGSEGV, Segmentation fault.
QScreen::availableSize (this=0x0) at /usr/src/debug/qt6-base/qtbase-everywhere-src-6.6.1/src/gui/kernel/qscreen.cpp:316
316         Q_D(const QScreen);                                                                                                                                               
(gdb) bt
#0  QScreen::availableSize() const (this=0x0) at /usr/src/debug/qt6-base/qtbase-everywhere-src-6.6.1/src/gui/kernel/qscreen.cpp:316
#1  0x00005555555a966b in  ()
#2  0x00007ffff5245cd0 in __libc_start_call_main (main=main@entry=0x5555555a93e0, argc=argc@entry=1, argv=argv@entry=0x7fffffffd8c8)
    at ../sysdeps/nptl/libc_start_call_main.h:58
#3  0x00007ffff5245d8a in __libc_start_main_impl
    (main=0x5555555a93e0, argc=1, argv=0x7fffffffd8c8, init=<optimized out>, fini=<optimized out>, rtld_fini=<optimized out>, stack_end=0x7fffffffd8b8)
    at ../csu/libc-start.c:360
#4  0x00005555555a98c5 in  ()
(gdb)

awacha commented on 2023-12-13 16:06 (UTC)

I tried it today, and I don't get any segfaults. On the other hand, permissions on the installed files were incorrect, I fixed that.

hmcezar commented on 2023-12-13 13:51 (UTC)

I'm getting a 'segmentation fault (core dumped)' when trying to open primus. Is anyone experiencing something similar?

I tried uninstalling, making the package again, and reinstalling, but it didn't work.

awacha commented on 2019-07-16 06:05 (UTC)

The problem with missing libgfortran.so.4 should be solved now. I have added gcc7-libs (from AUR) as a dependency and modified the start scripts in /opt/atsas/bin.

apollo753 commented on 2018-10-15 15:28 (UTC)

ATSAS currently requires libgfortran.so.4 to run, current default version on Arch is libgfortran.so.5. A symbolic link of libgfortran.so.4 -> libgfortran.so.5 does not work. I had to add the old libgfortran.so.4 library to my system to get ATSAS to work however no problems since.

awacha commented on 2016-11-03 12:57 (UTC)

The actual sources have to be downloaded by the user from the upstream site: https://www.embl-hamburg.de/biosaxs/download.html