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Package Details: qtl-seq 2.2.8-1
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| Git Clone URL: | https://aur.archlinux.org/qtl-seq.git (read-only, click to copy) |
|---|---|
| Package Base: | qtl-seq |
| Description: | Pipeline for bulk segregant analysis. https://doi.org/10.7717/peerj.13170 |
| Upstream URL: | https://github.com/YuSugihara/QTL-seq |
| Licenses: | GPL |
| Submitter: | kbipinkumar |
| Maintainer: | kbipinkumar (BioArchLinuxBot) |
| Last Packager: | BioArchLinuxBot |
| Votes: | 0 |
| Popularity: | 0.000000 |
| First Submitted: | 2022-12-21 09:47 (UTC) |
| Last Updated: | 2024-10-18 06:06 (UTC) |
Dependencies (13)
- bcftoolsAUR (bcftools-gitAUR)
- bwaAUR
- python-matplotlib (python-matplotlib-gitAUR)
- python-numpy (python-numpy-flameAUR, python-numpy-gitAUR, python-numpy1AUR, python-numpy-mkl-tbbAUR, python-numpy-mklAUR, python-numpy-mkl-binAUR)
- python-pandas
- python-seaborn
- samtoolsAUR (samtools-gitAUR)
- snpeffAUR
- trimmomaticAUR
- cython (cython-gitAUR, cython0AUR) (make)
- python-setuptools (make)
- python-setuptools-scm (make)
- mutmapAUR (optional) – identify causative mutations responsible for phenotype