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Package Details: r-bsgenome 1.74.0-1
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| Git Clone URL: | https://aur.archlinux.org/r-bsgenome.git (read-only, click to copy) |
|---|---|
| Package Base: | r-bsgenome |
| Description: | Software infrastructure for efficient representation of full genomes and their SNPs |
| Upstream URL: | https://bioconductor.org/packages/BSgenome |
| Licenses: | Artistic2.0 |
| Submitter: | BioArchLinuxBot |
| Maintainer: | BioArchLinuxBot |
| Last Packager: | BioArchLinuxBot |
| Votes: | 0 |
| Popularity: | 0.000000 |
| First Submitted: | 2022-06-05 21:26 (UTC) |
| Last Updated: | 2024-11-09 22:55 (UTC) |
Dependencies (28)
- r (r352AUR, r-mklAUR)
- r-biocgenericsAUR
- r-biocioAUR
- r-biostringsAUR
- r-genomeinfodbAUR
- r-genomicrangesAUR
- r-irangesAUR
- r-matrixstatsAUR
- r-rsamtoolsAUR
- r-rtracklayerAUR
- r-s4vectorsAUR
- r-xvectorAUR
- r-biobaseAUR (optional)
- r-biocmanagerAUR (optional)
- r-bsgenome.celegans.ucsc.ce2AUR (optional)
- r-bsgenome.hsapiens.ncbi.grch38AUR (optional)
- r-bsgenome.hsapiens.ucsc.hg38AUR (optional)
- r-bsgenome.hsapiens.ucsc.hg38.masked (optional)
- r-bsgenome.mmusculus.ucsc.mm10AUR (optional)
- r-bsgenome.rnorvegicus.ucsc.rn5 (optional)
- Show 8 more dependencies...
Required by (145)
- r-allelicimbalance
- r-appreci8r
- r-atacseqqc
- r-atsnp
- r-bambu
- r-beat
- r-biostrings (optional)
- r-biovizbase (optional)
- r-bsgenome.celegans.ucsc.ce2
- r-bsgenome.drerio.ucsc.danrer7
- r-bsgenome.ecoli.ncbi.20080805
- r-bsgenome.hsapiens.1000genomes.hs37d5
- r-bsgenome.hsapiens.ncbi.grch38
- r-bsgenome.hsapiens.ucsc.hg18
- r-bsgenome.hsapiens.ucsc.hg19
- r-bsgenome.hsapiens.ucsc.hg38
- r-bsgenome.mmusculus.ucsc.mm10
- r-bsgenome.mmusculus.ucsc.mm9
- r-bsgenome.scerevisiae.ucsc.saccer2
- r-bsgenome.scerevisiae.ucsc.saccer3
- Show 125 more...