blob: feb533134ccb0ac6af80b5204fcf997e8d844114 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
|
pkgbase = bio-tbtools
pkgdesc = GUI/CommandLine Tool Box for biologistists to utilize NGS data. \ https://doi.org/10.1016/j.molp.2023.09.010
pkgver = 2.148
pkgrel = 1
epoch = 1
url = https://github.com/CJ-Chen/TBtools-II
arch = x86_64
license = unknown
makedepends = unzip
makedepends = gendesk
depends = java-runtime>=11
depends = bash
optdepends = blast+: BLAST support
optdepends = diamond: quick blast(needed in quick MCScanx scan) support
optdepends = mcscanx: collinear scan support
optdepends = hmmer: HMM Search support
optdepends = muscle: align support
optdepends = trimal: large scale align support
optdepends = iqtree: maximum likelihood phylogenomic tree support
optdepends = kaks_calculator: kaks calculate support
source = https://github.com/CJ-Chen/TBtools-II/releases/download/2.148/TBtools_JRE1.6.jar
sha256sums = 0b8c8ec94187b6e03754ad72cafe3bff461ac8d1b9d115663c6e57fa8f31f34d
pkgname = bio-tbtools
|