summarylogtreecommitdiffstats
path: root/.SRCINFO
blob: feb533134ccb0ac6af80b5204fcf997e8d844114 (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
pkgbase = bio-tbtools
	pkgdesc = GUI/CommandLine Tool Box for biologistists to utilize NGS data. \ https://doi.org/10.1016/j.molp.2023.09.010
	pkgver = 2.148
	pkgrel = 1
	epoch = 1
	url = https://github.com/CJ-Chen/TBtools-II
	arch = x86_64
	license = unknown
	makedepends = unzip
	makedepends = gendesk
	depends = java-runtime>=11
	depends = bash
	optdepends = blast+: BLAST support
	optdepends = diamond: quick blast(needed in quick MCScanx scan) support
	optdepends = mcscanx: collinear scan support
	optdepends = hmmer: HMM Search support
	optdepends = muscle: align support
	optdepends = trimal: large scale align support
	optdepends = iqtree: maximum likelihood phylogenomic tree support
	optdepends = kaks_calculator: kaks calculate support
	source = https://github.com/CJ-Chen/TBtools-II/releases/download/2.148/TBtools_JRE1.6.jar
	sha256sums = 0b8c8ec94187b6e03754ad72cafe3bff461ac8d1b9d115663c6e57fa8f31f34d

pkgname = bio-tbtools