.SRCINFO


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pkgbase = bowtie2-git
	pkgdesc = Tool for aligning sequencing reads to long reference sequences
	pkgver = 2.5.4.r0.g4cf8d52
	pkgrel = 1
	url = https://bowtie-bio.sourceforge.net/bowtie2
	arch = x86_64
	license = GPL-3.0-only
	makedepends = git
	makedepends = jdk-openjdk
	makedepends = cmake
	depends = perl
	depends = python
	provides = bowtie2
	conflicts = bowtie2
	source = bowtie2-git::git+https://github.com/BenLangmead/bowtie2
	source = git+https://github.com/simd-everywhere/simde-no-tests.git
	source = git+https://github.com/ch4rr0/libsais.git
	source = git+https://github.com/ncbi/sra-tools.git
	source = git+https://github.com/ncbi/ncbi-vdb.git
	sha256sums = SKIP
	sha256sums = SKIP
	sha256sums = SKIP
	sha256sums = SKIP
	sha256sums = SKIP

pkgname = bowtie2-git