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pkgbase = cufflinks-git
pkgdesc = Transcriptome assembly and differential expression analysis for RNA-Seq
pkgver = 2.2.1.r89.gdc3b0cb
pkgrel = 1
url = http://cole-trapnell-lab.github.io/cufflinks/
arch = x86_64
license = BSL-1.0
makedepends = boost
makedepends = git
depends = boost-libs
depends = eigen
depends = python
depends = samtools
provides = cufflinks
conflicts = cufflinks
source = git+https://github.com/cole-trapnell-lab/cufflinks.git
source = cufflinks-git.patch::https://github.com/cole-trapnell-lab/cufflinks/pull/108.patch
sha256sums = SKIP
sha256sums = 22c7ff96d9081290edb10bbdf4193eb08f6d9b5b64980eb82ce9cb62fb513c97
pkgname = cufflinks-git
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