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pkgbase = r-bambu
pkgdesc = Reference-guided isoform reconstruction and quantification for long read RNA-Seq data
pkgver = 3.6.0
pkgrel = 1
url = https://bioconductor.org/packages/bambu
arch = x86_64
license = GPL
depends = r
depends = r-biocgenerics
depends = r-biocparallel
depends = r-data.table
depends = r-dplyr
depends = r-genomeinfodb
depends = r-genomicalignments
depends = r-genomicfeatures
depends = r-genomicranges
depends = r-iranges
depends = r-rcpp
depends = r-rcpparmadillo
depends = r-rsamtools
depends = r-s4vectors
depends = r-summarizedexperiment
depends = r-tidyr
depends = r-xgboost
depends = r-bsgenome
optdepends = r-annotationdbi
optdepends = r-apeglm
optdepends = r-biocfilecache
optdepends = r-biostrings
optdepends = r-bsgenome.hsapiens.ncbi.grch38
optdepends = r-circlize
optdepends = r-complexheatmap
optdepends = r-deseq2
optdepends = r-dexseq
optdepends = r-experimenthub
optdepends = r-ggbio
optdepends = r-ggplot2
optdepends = r-gridextra
optdepends = r-knitr
optdepends = r-nanoporernaseq
optdepends = r-parallel
optdepends = r-purrr
optdepends = r-rmarkdown
optdepends = r-testthat
optdepends = r-txdb.hsapiens.ucsc.hg38.knowngene
optdepends = r-utils
source = https://bioconductor.org/packages/release/bioc/src/contrib/bambu_3.6.0.tar.gz
sha256sums = bc7043c8950f12daf095f340b83c50b55dc3163c26a0e57e07f6b26dc951c6de
pkgname = r-bambu
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