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pkgbase = unicycler
pkgdesc = Hybrid assembly pipeline for bacterial genomes.
pkgver = 0.5.0
pkgrel = 1
url = https://github.com/rrwick/Unicycler/
arch = any
license = GPL
makedepends = gcc
makedepends = clang
makedepends = python-setuptools
optdepends = spades: short read or hybird assembly
optdepends = racon: long-read or hybrid assembly
optdepends = pilon: polishing
optdepends = samtools: polishing
optdepends = bowtie2: polishing
optdepends = blast+: rotating circular contigs
source = https://github.com/rrwick/Unicycler//archive/refs/tags/v0.5.0.tar.gz
b2sums = 7e333d2e7b855e2c914ea8488c9f81626eb3a3c9d884bbab7196598416c824c23e3eb27cb9ac3001ec82dc7576fc44558055b86fe3d3c6bdf5d8afaf2592236d
pkgname = unicycler
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