blob: acf57d2c5d2f0bcd866075206f0b5fcc28344913 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
|
# Maintainer: Chocobo1 <chocobo1 AT archlinux DOT net>
pkgname=bcftools-git
pkgver=1.17.r18.g60c65eb9
pkgrel=1
pkgdesc="Tools for variant calling and manipulating VCFs and BCFs"
arch=('i686' 'x86_64')
url="https://samtools.github.io/bcftools/"
license=('custom')
depends=('glibc' 'gsl' 'htslib' 'zlib')
makedepends=('git')
optdepends=('python')
provides=("bcftools=$pkgver")
conflicts=('bcftools')
source=("git+https://github.com/samtools/bcftools.git")
sha256sums=('SKIP')
pkgver() {
cd "bcftools"
git describe --long --tags | sed 's/^v//;s/\([^-]*-g\)/r\1/;s/-/./g'
}
build() {
cd "bcftools"
autoreconf -fi
./configure \
--prefix="/usr" \
--with-bcf-plugin-dir="/usr/lib/bcftools" \
--enable-libgsl
make
}
check() {
cd "bcftools"
#make check
}
package() {
cd "bcftools"
make DESTDIR="$pkgdir" install
install -Dm644 "LICENSE" -t "$pkgdir/usr/share/licenses/bcftools"
}
|