PKGBUILD


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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=AnnotationForge
_pkgver=1.48.0
pkgname=r-${_pkgname,,}
pkgver=1.48.0
pkgrel=1
pkgdesc='Tools for building SQLite-based annotation data packages'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
  r
  r-annotationdbi
  r-biobase
  r-biocgenerics
  r-dbi
  r-rcurl
  r-rsqlite
  r-s4vectors
  r-xml
)
optdepends=(
  r-affy
  r-biocfilecache
  r-biocmanager
  r-biocstyle
  r-biomart
  r-biostrings
  r-genomeinfodb
  r-go.db
  r-hgu95av2.db
  r-homo.sapiens
  r-httr
  r-human.db0
  r-knitr
  r-markdown
  r-org.hs.eg.db
  r-runit
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('f782a66fdbf5e7503b798aa06e2184f158d5ec73988d477225890f82a71c7ad4')

build() {
  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}

package() {
  install -dm0755 "${pkgdir}/usr/lib/R/library"
  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et: