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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=BAGS
_pkgver=2.48.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="A Bayesian Approach for Geneset Selection"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('Artistic-2.0')
depends=(
  r-biobase
  r-breastcancervdx
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('8030ae4b5bcf74fef10a3c5930cc8c56')
b2sums=('5afcd675dcb41a3929d0f1c3c54da3d103eeff3fd51b7097a27e5560acdf9ad5666398ba4bd07ea7f37ff5a8e60985923a237b6880033b555708348b0229be5c')

build() {
  mkdir build
  R CMD INSTALL -l build "$_pkgname"
}

package() {
  install -d "$pkgdir/usr/lib/R/library"
  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}