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# system requirements: C++11
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=BASiCS
_pkgver=2.16.0
pkgname=r-${_pkgname,,}
pkgver=2.16.0
pkgrel=1
pkgdesc='Bayesian Analysis of Single-Cell Sequencing data'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
gcc
r
r-assertthat
r-biobase
r-biocgenerics
r-biocparallel
r-coda
r-cowplot
r-ggextra
r-ggplot2
r-hexbin
r-matrixstats
r-posterior
r-rcpp
r-rcpparmadillo
r-reshape2
r-s4vectors
r-scran
r-scuttle
r-singlecellexperiment
r-summarizedexperiment
r-viridis
)
optdepends=(
r-biocstyle
r-knitr
r-magick
r-rmarkdown
r-scrnaseq
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('dcca1ff275d9ed9e9c05be6d3ac8421f284ea75a9bad838c705b650b94458c65')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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