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# Maintainer: peippo <christoph+aur@christophfink.com>
# Contributor: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com
# Contributor: Grey Christoforo <first name at last name dot net>
_bcname=BiocGenerics
_bcver=0.50.0
pkgname=r-${_bcname,,}
pkgver=${_bcver//[:-]/.}
pkgrel=1
pkgdesc="S4 generic functions used in Bioconductor"
arch=(any)
url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html"
license=("Artistic2.0")
depends=("r>=4.0.0")
optdepends=(
"r-biobase"
"r-s4vectors"
"r-iranges"
"r-genomicranges"
"r-delayedarray"
"r-biostrings"
"r-rsamtools"
"r-annotationdbi"
"r-affy"
"r-affyplm"
"r-deseq2"
"r-flowclust"
"r-msnbase"
"r-annotate"
"r-runit"
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz")
b2sums=("ee41de46686cf1abf1857507a258c2bc2939d3bd0ee952ec9b5b09556cbeb863148818aedbe22c9cb2adef1fa8477071f12cca398538efb295163c6fd382c012")
build() {
R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_bcname}" "${pkgdir}/usr/lib/R/library"
if [[ -f "${_bcname}/LICENSE" ]]; then
install -Dm0644 "${_bcname}/LICENSE" "${pkgdir}/usr/share/licenses/${pkgname}/LICENSE"
fi
}
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