PKGBUILD


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# system requirements: C++11
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=BiocNeighbors
_pkgver=2.0.1
pkgname=r-${_pkgname,,}
pkgver=2.0.1
pkgrel=1
pkgdesc='Nearest Neighbor Detection for Bioconductor Packages'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
  r
  r-biocparallel
  r-rcpp
  r-rcpphnsw
  r-s4vectors
  r-assorthead
)
makedepends=(
  gcc
)
optdepends=(
  r-biocstyle
  r-fnn
  r-knitr
  r-rcppannoy
  r-rcpphnsw
  r-rmarkdown
  r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('d88bce98c06f17f7161f39704654a135d7edc155cf255e27ced03ed8a348f337')

build() {
  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}

package() {
  install -dm0755 "${pkgdir}/usr/lib/R/library"
  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et: