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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=BioQC
_pkgver=1.34.0
pkgname=r-${_pkgname,,}
pkgver=1.34.0
pkgrel=1
pkgdesc='Detect tissue heterogeneity in expression profiles with gene sets'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biobase
r-edger
r-rcpp
)
optdepends=(
r-covr
r-ggplot2
r-gplots
r-gridextra
r-hgu133plus2.db
r-ineq
r-knitr
r-lattice
r-latticeextra
r-limma
r-org.hs.eg.db
r-plyr
r-rbenchmark
r-rcolorbrewer
r-reshape2
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('0ce1f8aaeb640dd73326806717449a3654b0e0c2d167860dce2e34700264a182')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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