blob: 0f145e62cbd64e7a456a55e0ae4d8de0516ac00e (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=biotmle
_pkgver=1.30.0
pkgname=r-${_pkgname,,}
pkgver=1.30.0
pkgrel=1
pkgdesc='Targeted Learning with Moderated Statistics for Biomarker Discovery'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-assertthat
r-biocgenerics
r-biocparallel
r-dplyr
r-drtmle
r-ggplot2
r-ggsci
r-limma
r-s4vectors
r-summarizedexperiment
r-superheat
r-tibble
)
optdepends=(
r-arm
r-biocstyle
r-biotmledata
r-dbi
r-earth
r-knitr
r-matrix
r-ranger
r-rmarkdown
r-superlearner
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('dc3012f11ecd3bb44a8bd1baeaafd0c91829b8182648bf81aa53ab254c49a71a')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
|