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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=bumphunter
_pkgver=1.46.0
pkgname=r-${_pkgname,,}
pkgver=1.46.0
pkgrel=1
pkgdesc='Bump Hunter'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
r
r-annotationdbi
r-biocgenerics
r-dorng
r-foreach
r-genomeinfodb
r-genomicfeatures
r-genomicranges
r-iranges
r-iterators
r-limma
r-locfit
r-matrixstats
r-s4vectors
)
optdepends=(
r-doparallel
r-org.hs.eg.db
r-runit
r-testthat
r-txdb.hsapiens.ucsc.hg19.knowngene
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('c8f0815529fd7cc8eb147894a1acca2b5ce8547b0636e77cbe65de9a1f686521')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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