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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=celda
_pkgver=1.20.0
pkgname=r-${_pkgname,,}
pkgver=1.20.0
pkgrel=1
pkgdesc='CEllular Latent Dirichlet Allocation'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-circlize
r-complexheatmap
r-data.table
r-dbscan
r-delayedarray
r-digest
r-doparallel
r-enrichr
r-foreach
r-ggplot2
r-ggrepel
r-gtable
r-matrixstats
r-mcmcprecision
r-multipanelfigure
r-plyr
r-rcolorbrewer
r-rcpp
r-rcppeigen
r-reshape2
r-rtsne
r-s4vectors
r-scales
r-scater
r-scran
r-singlecellexperiment
r-stringr
r-summarizedexperiment
r-uwot
r-withr
)
optdepends=(
r-biocmanager
r-biocstyle
r-biomart
r-covr
r-knitr
r-m3dexampledata
r-rmarkdown
r-roxygen2
r-singlecelltk
r-tenxpbmcdata
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('1987b39411c76dace651566ae5d5cbdc0bbaaa3eb3e7116bb4a495cf9eac5b34')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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