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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=CelliD
_pkgver=1.12.0
pkgname=r-${_pkgname,,}
pkgver=1.12.0
pkgrel=1
pkgdesc='Unbiased Extraction of Single Cell gene signatures using Multiple Correspondence Analysis'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biocparallel
r-data.table
r-fastmatch
r-fgsea
r-ggplot2
r-glue
r-irlba
r-matrixstats
r-pbapply
r-rcpp
r-rcpparmadillo
r-reticulate
r-rtsne
r-scater
r-seurat
r-singlecellexperiment
r-stringr
r-summarizedexperiment
r-tictoc
r-umap
)
optdepends=(
r-biocstyle
r-destiny
r-ggpubr
r-ggrepel
r-knitr
r-rmarkdown
r-testthat
r-tidyverse
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('746d8c2a9e2edcc5ae3efe5d10af084c0a40daade2769ca12a4d6a858ba6f030')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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