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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=chihaya
_pkgver=1.4.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Save Delayed Operations to a HDF5 File"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-only')
depends=(
r-delayedarray
r-hdf5array
r-rcpp
r-rhdf5
zlib
)
makedepends=(
r-rhdf5lib
)
checkdepends=(
r-biocsingular
r-residualmatrix
r-testthat
)
optdepends=(
r-biocgenerics
r-biocsingular
r-biocstyle
r-knitr
r-residualmatrix
r-rmarkdown
r-s4vectors
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('dcbb0f86dbec8e9a1df405fd798bc7f6')
b2sums=('4750bc874fe598b071a17d778aa9f722279079b86e437a4b2826aea91781a2ad1687de016bb61fe774c3f429b4b8c502e6fdc9bdd383c33aac672d4a7e101870')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
check() {
cd "$_pkgname/tests"
R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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