PKGBUILD


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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=CONSTANd
_pkgver=1.16.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Data normalization by matrix raking"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('NPOSL-3.0')
depends=(
  r
)
optdepends=(
  r-biocstyle
  r-cairo
  r-ggplot2
  r-gridextra
  r-knitr
  r-limma
  r-magick
  r-rmarkdown
  r-tidyr
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('00ffc09fef66b1d54ab139a5a4862388')
b2sums=('9a21059265af47025183bed157f5046926c34a907a9308ab91f1146bd85220e9b348b4d38c3a5bc5eb4ec7a0b5b232ef389bd5f5030aa1510711808d6440cf58')

build() {
  mkdir build
  R CMD INSTALL -l build "$_pkgname"
}

package() {
  install -d "$pkgdir/usr/lib/R/library"
  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"

  install -d "$pkgdir/usr/share/licenses/$pkgname"
  ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
}