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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=copa
_pkgver=1.74.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Functions to perform cancer outlier profile analysis"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('Artistic-2.0')
depends=(
r-biobase
)
optdepends=(
r-colonca
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('4a01631dd274c80e9005beb1021e1684')
b2sums=('c7e87d89972eaa5ba00871bdde9bfa77278f8f69ecceb50d28999e9002fc7133eb7c7fd13c51db0d6002cc13c4904fb131a30c155644d9f1d7ce10da29b0075f')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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