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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=dartR
_pkgver=2.9.7
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Importing and Analysing 'SNP' and 'Silicodart' Data Generated by Genome-Wide Restriction Fragment Analysis"
arch=(any)
url="https://cran.r-project.org/package=$_pkgname"
license=('GPL-3.0-or-later')
depends=(
r-adegenet
r-ape
r-crayon
r-dartr.data
r-data.table
r-dplyr
r-fields
r-foreach
r-ggplot2
r-gridextra
r-patchwork
r-plyr
r-popgenreport
r-raster
r-reshape2
r-shiny
r-snprelate
r-sp
r-stampp
r-stringr
r-tidyr
r-vegan
)
optdepends=(
r-devtools
r-directlabels
r-dismo
r-doparallel
r-expm
r-gdistance
r-gganimate
r-ggrepel
r-ggtern
r-ggthemes
r-gplots
r-gtable
r-hardyweinberg
r-hierfstat
r-igraph
r-iterpc
r-knitr
r-label.switching
r-leaflet
r-leaflet.minicharts
r-markdown
r-mmod
r-networkd3
r-pegas
r-pheatmap
r-plotly
r-poppr
r-proxy
r-purrr
r-qvalue
r-rcolorbrewer
r-rcpp
r-rgl
r-rmarkdown
r-rrblup
r-scales
r-seqinr
r-shinybs
r-shinyjs
r-shinythemes
r-shinywidgets
r-siber
r-snpstats
r-stringi
r-terra
r-testthat
r-tibble
r-vcfr
r-viridis
r-zoo
)
source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('f76ad45d41f4c304d19d3f7258362549')
b2sums=('6080154deb2c5a75e43fec5ed5c9c03f0f63bd62439232dd7d3c671faae61ccef4d94edac4c49903746618c00d368bd3525f2c9381bfbed5e657d226ffcaeb82')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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