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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=DepecheR
_pkgver=1.22.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Determination of essential phenotypic elements of clusters in high-dimensional entities"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('MIT')
depends=(
r-beanplot
r-clusterr
r-collapse
r-dosnow
r-dplyr
r-fnn
r-foreach
r-ggplot2
r-gmodels
r-gplots
r-matrixstats
r-mixomics
r-moments
r-rcpp
r-reshape2
r-robustbase
r-viridis
)
makedepends=(
r-rcppeigen
)
optdepends=(
r-biocstyle
r-knitr
r-rmarkdown
r-testthat
r-uwot
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('92e4d0d9bdaa1db09f4a2785693aa15e')
b2sums=('ac943162174920bf3f8b15c5eb130d43ec8fe67d63957c4a79afcacf71604454e39b7f40bdab07f08187cbd9a4e7ab405021a4d24ed9fd9d8a6a552af4da9b72')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
install -d "$pkgdir/usr/share/licenses/$pkgname"
ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
}
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