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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=DEScan2
_pkgver=1.24.0
pkgname=r-${_pkgname,,}
pkgver=1.24.0
pkgrel=1
pkgdesc='Differential Enrichment Scan 2'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
r
r-biocgenerics
r-biocparallel
r-chippeakanno
r-data.table
r-delayedarray
r-genomeinfodb
r-genomicalignments
r-genomicranges
r-glue
r-iranges
r-plyr
r-rcpp
r-rcpparmadillo
r-rtracklayer
r-s4vectors
r-summarizedexperiment
)
optdepends=(
r-biocstyle
r-edaseq
r-edger
r-knitr
r-limma
r-rcolorbrewer
r-rmarkdown
r-ruvseq
r-statmod
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('20bbf07908ac73d60ad8b28bcc5a2ad2d365752ce145c0e257bd1e574ba2cc96')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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