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# system requirements: C++17, GNU make
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=epialleleR
_pkgver=1.14.0
pkgname=r-${_pkgname,,}
pkgver=1.14.0
pkgrel=1
pkgdesc='Fast, Epiallele-Aware Methylation Reporter'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
gcc
make
r
r-bh
r-biocgenerics
r-data.table
r-genomeinfodb
r-genomicranges
r-rcpp
r-rhtslib
r-summarizedexperiment
r-variantannotation
r-zlibbioc
)
optdepends=(
r-ggplot2
r-ggstance
r-gridextra
r-knitr
r-rmarkdown
r-runit
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('bc48b89ac995322b34bc98e218cef856484ca89814aacca772545db270d2aa7d')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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