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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=escape
_pkgver=2.0.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Easy single cell analysis platform for enrichment"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('MIT')
depends=(
r-aucell
r-biocparallel
r-dplyr
r-ggdist
r-ggplot2
r-ggpointdensity
r-ggridges
r-gseabase
r-gsva
r-matrixgenerics
r-msigdbr
r-patchwork
r-reshape2
r-seuratobject
r-singlecellexperiment
r-stringr
r-summarizedexperiment
r-ucell
)
optdepends=(
r-biocstyle
r-hexbin
r-knitr
r-markdown
r-rcolorbrewer
r-rlang
r-rmarkdown
r-scran
r-seurat
r-spelling
r-testthat
r-vdiffr
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('7b3c16032574ae1639cf3d8b0f4eda1a')
b2sums=('85b0342930e2971515787fbd0739062c8a8faecb6a8bb7a73b93c9fe8c79994c90a4b8fa3f3cf0919e155f3cd316d6afc15f5e55335cd49b93cbd7ebadacc5bd')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
install -d "$pkgdir/usr/share/licenses/$pkgname"
ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
}
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