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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=genphen
_pkgver=1.24.0
pkgname=r-${_pkgname,,}
pkgver=1.24.0
pkgrel=4
pkgdesc='genphen: tool for quantification of genotype-phenotype associations in genome wide association studies (GWAS)'
arch=('any')
url="https://bioconductor.org/packages/3.15/${_pkgname}"
license=('GPL')
depends=(
r
r-biostrings
r-doparallel
r-e1071
r-foreach
r-ranger
r-rcpp
r-rpref
r-rstan
)
optdepends=(
r-ape
r-ggplot2
r-ggrepel
r-gridextra
r-knitr
r-reshape
r-testthat
r-xtable
)
source=("https://bioconductor.org/packages/3.15/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('6805ee931998ad03305a3b56a3356502cb0519cf1bba2f3fe931eece9ec2c0d4')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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