blob: 2308360fa1357992ff8cf9ec191bafe132a75af4 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=HMMcopy
_pkgver=1.50.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Copy number prediction with correction for GC and mappability bias for HTS data"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-only')
depends=(
r-data.table
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('9340386169b0560bc9e3fa9b139bc20b')
b2sums=('7eab867090c18309d55a6e53665aa28122755c707df9308ce6620affda87db6b42d43406502749d0493cc60ce530dc4dfd974a580f25aa05f26bc22e8033c19a')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
|