summarylogtreecommitdiffstats
path: root/PKGBUILD
blob: 888fd35c8f3fc1e709e9d0a66fa9116b5d1ec1c6 (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=immunoClust
_pkgver=1.38.0
pkgname=r-${_pkgname,,}
pkgver=1.38.0
pkgrel=1
pkgdesc='immunoClust - Automated Pipeline for Population Detection in Flow Cytometry'
arch=('x86_64')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
  r
  r-flowcore
  gsl
)
optdepends=(
  r-biocstyle
  r-testthat
  r-utils
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('1339a95f37deb987e02e20cabfb12b53b6f5edf6aa8903ac8d7475e3e8a7ceec')

build() {
  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}

package() {
  install -dm0755 "${pkgdir}/usr/lib/R/library"
  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et: