PKGBUILD


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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=KBoost
_pkgver=1.14.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Inference of gene regulatory networks from gene expression data"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-2.0-only OR GPL-3.0-only')
depends=(
  r
)
optdepends=(
  r-knitr
  r-rmarkdown
  r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('4a2b4d297e7f50f34be5bae46abe46eb')
b2sums=('0d72d7dc6911abec139de5c1f59e5a980f50ecc24b8c04b77ded1ef572acfe6d77e89bf3c14aa569a94d25e151861b61a15d5a028fa548e331cafbf4e1c70d15')

build() {
  mkdir build
  R CMD INSTALL -l build "$_pkgname"
}

package() {
  install -d "$pkgdir/usr/lib/R/library"
  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}