blob: 25a35a272b89f9d523cc870070a3d4e13526a8c6 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
|
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=MetaboSignal
_pkgver=1.34.0
pkgname=r-${_pkgname,,}
pkgver=1.34.0
pkgrel=1
pkgdesc='MetaboSignal: a network-based approach to overlay and explore metabolic and signaling KEGG pathways'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-annotationdbi
r-biomart
r-ensdb.hsapiens.v75
r-hpar
r-igraph
r-kegggraph
r-keggrest
r-mwastools
r-mygene
r-org.hs.eg.db
r-rcurl
)
optdepends=(
r-biocgenerics
r-biocstyle
r-knitr
r-rmarkdown
r-runit
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('7249fa04b7486e74952b0e69afde24ba3e2387f56003c6f7a5dc3a083436b151')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
|