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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=MiRaGE
_pkgver=1.48.0
pkgname=r-${_pkgname,,}
pkgver=1.48.0
pkgrel=1
pkgdesc='MiRNA Ranking by Gene Expression'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-annotationdbi
r-biobase
r-biocgenerics
r-biocmanager
r-s4vectors
)
optdepends=(
r-beadarrayexampledata
r-biomart
r-biostrings
r-bsgenome
r-bsgenome.hsapiens.ucsc.hg19
r-bsgenome.mmusculus.ucsc.mm10
r-genomicfeatures
r-genomicranges
r-humanstemcell
r-iranges
r-mirnatarget
r-seqinr
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('351cfa6634cf3e907adfb3f9dd6d3765964bb402ffa4021aa1cf2dc030bd7e01')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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