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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=miRspongeR
_pkgver=2.8.1
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Identification and analysis of miRNA sponge regulation"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-only')
depends=(
r-clusterprofiler
r-corpcor
r-doparallel
r-dose
r-foreach
r-igraph
r-linkcomm
r-mcl
r-org.hs.eg.db
r-rcpp
r-reactomepa
r-sponge
)
optdepends=(
r-biocstyle
r-knitr
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('291beda79f86973458e8bc0f50130edf')
b2sums=('5549ae12f9a394e9b045efadc8ac89afeb531878f2cfe5e2acf8f2a4cb95d882522e3ad4e56f1837c07671cee7e9922c71e4f149c4157dbfa4805dbaf8246ad1')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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