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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=pepXMLTab
_pkgver=1.42.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Parsing pepXML files and filter based on peptide FDR"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('Artistic-2.0')
depends=(
r-xml
)
optdepends=(
r-biocgenerics
r-runit
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('2e63bbaa89bb69b7e700373e6d418738')
b2sums=('706c7878472371ec253c91dc1a297eec94d01a09d12a6b99931532624986c3ff7ba027e5373d2acb363a2f3fc4d1ccfd84a52b3ac567b3d8487126dacdcce8ba')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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