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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=pmp
_pkgver=1.16.0
pkgname=r-${_pkgname,,}
pkgver=1.16.0
pkgrel=1
pkgdesc='Peak Matrix Processing and signal batch correction for metabolomics datasets'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-ggplot2
r-impute
r-matrixstats
r-missforest
r-pcamethods
r-reshape2
r-s4vectors
r-summarizedexperiment
)
optdepends=(
r-biocstyle
r-covr
r-gridextra
r-knitr
r-magick
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('32c062e1b825b696c0956981014ad8d4152eb63596ca18aabff1db615ed8d267')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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