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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=POMA
_pkgver=1.14.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Tools for Omics Data Analysis"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-only')
depends=(
r-broom
r-caret
r-complexheatmap
r-dbscan
r-deseq2
r-dplyr
r-fsa
r-ggplot2
r-ggrepel
r-glmnet
r-impute
r-janitor
r-limma
r-lme4
r-magrittr
r-mixomics
r-randomforest
r-rankprod
r-rlang
r-summarizedexperiment
r-sva
r-tibble
r-tidyr
r-uwot
r-vegan
)
optdepends=(
r-biocstyle
r-covr
r-ggraph
r-ggtext
r-knitr
r-patchwork
r-plotly
r-testthat
r-tidyverse
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('2319e020f51efe618ec87124847cfbc4')
b2sums=('992e5eafcebcc30a9d52249b86008f28b47d01925a1ffd396cbc204f12a34006f29c4e1139af44fdc7bd924a7853bd84528df4e24d58c76af03a8df47cfa4437')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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