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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=profileplyr
_pkgver=1.20.0
pkgname=r-${_pkgname,,}
pkgver=1.20.0
pkgrel=1
pkgdesc='Visualization and annotation of read signal over genomic ranges with profileplyr'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biocgenerics
r-biocparallel
r-chipseeker
r-circlize
r-complexheatmap
r-dplyr
r-enrichedheatmap
r-genomeinfodb
r-genomicfeatures
r-genomicranges
r-ggplot2
r-iranges
r-magrittr
r-org.hs.eg.db
r-org.mm.eg.db
r-pheatmap
r-r.utils
r-rgreat
r-rjson
r-rlang
r-rsamtools
r-rtracklayer
r-s4vectors
r-soggi
r-summarizedexperiment
r-tidyr
r-tiff
r-txdb.hsapiens.ucsc.hg19.knowngene
r-txdb.hsapiens.ucsc.hg38.knowngene
r-txdb.mmusculus.ucsc.mm10.knowngene
r-txdb.mmusculus.ucsc.mm9.knowngene
)
optdepends=(
r-biocstyle
r-cairo
r-knitr
r-png
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('6c6d1776aaa717a33a6ace4317bbddc9f824cc78b904aa54d509141decacf2be')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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