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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=RCSL
_pkgver=1.12.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Rank Constrained Similarity Learning for single cell RNA sequencing data"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('Artistic-2.0')
depends=(
r-ggplot2
r-igraph
r-matrixgenerics
r-nbclust
r-pracma
r-rcpp
r-rcppannoy
r-rtsne
r-singlecellexperiment
r-umap
)
optdepends=(
r-biocstyle
r-knitr
r-mclust
r-rmarkdown
r-testthat
r-tidyverse
r-tinytex
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('059014cb0394cffb1011e66abb8ef210')
b2sums=('e443c30267f75816daee44d6b20bd71acc0a345ea431ab01dc651783801730562313aff1cc5d09a7597cdc83a2b23e250f20f8b8ff83fa9456a1fa3ad7076a0f')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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