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# system requirements: Java (>= 1.8)
# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=sarks
_pkgver=1.18.0
pkgname=r-${_pkgname,,}
pkgver=1.18.0
pkgrel=1
pkgdesc='Suffix Array Kernel Smoothing for discovery of correlative sequence motifs and multi-motif domains'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('BSD')
depends=(
r
r-binom
r-biostrings
r-iranges
r-rjava
)
optdepends=(
r-biocgenerics
r-ggplot2
r-runit
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('126a89d57632391465a987b14c7ecb8fa2172b30d90856b501702e527cf940b2')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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