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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=seqsetvis
_pkgver=1.26.0
pkgname=r-${_pkgname,,}
pkgver=1.26.0
pkgrel=1
pkgdesc='Set Based Visualizations for Next-Gen Sequencing Data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-cowplot
r-data.table
r-eulerr
r-genomeinfodb
r-genomicalignments
r-genomicranges
r-ggplot2
r-ggplotify
r-iranges
r-limma
r-pbapply
r-pbmcapply
r-png
r-rcolorbrewer
r-rsamtools
r-rtracklayer
r-s4vectors
r-scales
r-upsetr
)
optdepends=(
r-biocfilecache
r-biocmanager
r-biocstyle
r-chippeakanno
r-covr
r-knitr
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('5b7c2d72d070d13ccec55151d77d608de641340d615a4feed6da8ceee6e09ccf')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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