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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=SiPSiC
_pkgver=1.8.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Calculate Pathway Scores for Each Cell in scRNA-Seq Data"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-3.0-only')
depends=(
r-singlecellexperiment
)
optdepends=(
r-biocstyle
r-knitr
r-rmarkdown
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('8c95192faf1e3540fcdfa7a45c0a0e14')
b2sums=('72b162bee78f0c79ec8cf75fe97889c81bbd1d85b047db71bb8e003c34febab52e748ee6237931a9e5afde0291e1f1d2ce96ed216358f46874d433c97fd22d1b')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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