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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=spaMM
_pkgver=4.5.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Mixed-Effect Models, with or without Spatial Random Effects"
arch=(x86_64)
url="https://cran.r-project.org/package=$_pkgname"
license=('CECILL-2.0')
depends=(
gsl
r-backports
r-crayon
r-geometry
r-gmp
r-minqa
r-nloptr
r-numderiv
r-pbapply
r-proxy
r-rcpp
r-roi
)
makedepends=(
r-rcppeigen
)
checkdepends=(
r-testthat
)
optdepends=(
r-agridat
r-blackbox
r-foreach
r-future
r-future.apply
r-infusion
r-isorix
r-lme4
r-maps
r-multilevel
r-rann
r-rcdd
r-roi.plugin.glpk
r-rsae
r-rspectra
r-testthat
)
source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz"
"$_pkgname-LICENSE::http://www.cecill.info/licences/Licence_CeCILL_V2-en.txt")
md5sums=('36fc71641d03dfa436e37eb0eb8109d0'
'599cf91b33571e942d3ba5f9623b8011')
b2sums=('7a5fd8a9e592ce0e5e2d54f6f397c19f34d7f0b66126073f4b37b25d0c3d1071e2ace16629bc8da0d49efe92304114eb8dfb58476315ee8e0849c6788c7536fc'
'ff97dacc39b8597e670dbaf5bc0f0e4db73eada273708433fc227fa72c054a30a67dbc7b2416089d68f09ab65da721e5b30711022c41047d9cf706731d568038')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
check() {
cd "$_pkgname/tests"
R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla test-all.R
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
install -Dm644 "$_pkgname-LICENSE" "$pkgdir/usr/share/licenses/$pkgname/LICENSE"
}
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