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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=SparseArray
_pkgver=1.6.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="High-performance sparse data representation and manipulation in R"
arch=(x86_64)
url="https://bioconductor.org/packages/$_pkgname"
license=('Artistic-2.0')
depends=(
r-biocgenerics
r-iranges
r-matrixgenerics
r-matrixstats
r-s4arrays
r-s4vectors
r-xvector
)
checkdepends=(
r-testthat
)
optdepends=(
r-biocstyle
r-experimenthub
r-hdf5array
r-knitr
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('b57caafbc8b4ad3fa535a6b6180d0476')
b2sums=('d49377c215d9a9ad2da60413d0c3a20b11909f63c822e37dc5360abfaf3ace2b6b2aa2d9df68e9978395700d65b619254e3b8c938c181e0d110f892b685deaf2')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
check() {
cd "$_pkgname/tests"
R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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