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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=TimeSeriesExperiment
_pkgver=1.13.0
pkgname=r-${_pkgname,,}
pkgver=1.13.0
pkgrel=4
pkgdesc='Analysis for short time-series data'
arch=('any')
url="https://bioconductor.org/packages/3.15/${_pkgname}"
license=('MIT')
depends=(
r
r-deseq2
r-dplyr
r-dynamictreecut
r-edger
r-ggplot2
r-hmisc
r-limma
r-magrittr
r-proxy
r-s4vectors
r-summarizedexperiment
r-tibble
r-tidyr
r-vegan
r-viridis
)
optdepends=(
r-biobase
r-biocfilecache
r-circlize
r-complexheatmap
r-go.db
r-grdevices
r-grid
r-knitr
r-mass
r-org.hs.eg.db
r-org.mm.eg.db
r-rcolorbrewer
r-rmarkdown
r-upsetr
)
source=("https://bioconductor.org/packages/3.15/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('4cb8c6dedf67dc4571f7e4760f05df83b8348508dd2d85457a0da77172efb72d')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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