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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=tLOH
_pkgver=1.12.0
pkgname=r-${_pkgname,,}
pkgver=1.12.0
pkgrel=1
pkgdesc='Assessment of evidence for LOH in spatial transcriptomics pre-processed data using Bayes factor calculations'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-bestnormalize
r-data.table
r-depmixs4
r-dplyr
r-genomicranges
r-ggplot2
r-matrixgenerics
r-naniar
r-purrr
r-scales
r-stringr
r-variantannotation
)
optdepends=(
r-knitr
r-rmarkdown
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('61d3e9f7f7237e02ceb7ef75eadf4a66cd27c0307392ffc555c523e7b2060a65')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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