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diff --git a/mariner/tests/testthat/_snaps/InteractionArray.md b/mariner/tests/testthat/_snaps/InteractionArray.md
index 492df25..e6645e7 100644
--- a/mariner/tests/testthat/_snaps/InteractionArray.md
+++ b/mariner/tests/testthat/_snaps/InteractionArray.md
@@ -3,7 +3,7 @@
Code
counts(iarr, TRUE)
Output
- <11 x 11 x 10 x 2> array of class DelayedArray and type "double":
+ <11 x 11 x 10 x 2> DelayedArray object of type "double":
,,1,FS
14740000 14745000 14750000 ... 14785000 14790000
14435000 0 0 0 . 0 0
@@ -39,7 +39,7 @@
Code
counts(iarr[1:3, 1:2])
Output
- <11 x 11 x 3 x 2> array of class DelayedArray and type "double":
+ <11 x 11 x 3 x 2> DelayedArray object of type "double":
,,1,FS
[,1] [,2] [,3] ... [,10] [,11]
[1,] 0 0 0 . 0 0
@@ -64,7 +64,7 @@
Code
counts(iarr[3:4, 1])
Output
- <11 x 11 x 2 x 1> array of class DelayedArray and type "double":
+ <11 x 11 x 2 x 1> DelayedArray object of type "double":
,,1,FS
[,1] [,2] [,3] ... [,10] [,11]
[1,] 0 0 0 . 0 0
@@ -87,7 +87,7 @@
Code
counts(iarr[1:7, 1:2])
Output
- <11 x 11 x 7 x 2> array of class DelayedArray and type "double":
+ <11 x 11 x 7 x 2> DelayedArray object of type "double":
,,1,FS
[,1] [,2] [,3] ... [,10] [,11]
[1,] 0 0 0 . 0 0
@@ -112,7 +112,7 @@
Code
counts(iarr[1:7, 1])
Output
- <11 x 11 x 7 x 1> array of class DelayedArray and type "double":
+ <11 x 11 x 7 x 1> DelayedArray object of type "double":
,,1,FS
[,1] [,2] [,3] ... [,10] [,11]
[1,] 0 0 0 . 0 0
@@ -137,7 +137,7 @@
Code
counts(iarr[1, 1:2])
Output
- <11 x 11 x 1 x 2> array of class DelayedArray and type "double":
+ <11 x 11 x 1 x 2> DelayedArray object of type "double":
,,1,FS
[,1] [,2] [,3] ... [,10] [,11]
[1,] 0 0 0 . 0 0
@@ -160,7 +160,7 @@
Code
counts(iarr[1, 1])
Output
- <11 x 11 x 1 x 1> array of class DelayedArray and type "double":
+ <11 x 11 x 1 x 1> DelayedArray object of type "double":
,,1,FS
[,1] [,2] [,3] ... [,10] [,11]
[1,] 0 0 0 . 0 0
diff --git a/mariner/tests/testthat/_snaps/MergedGInteractions.md b/mariner/tests/testthat/_snaps/MergedGInteractions.md
index f27c0ed..999e149 100644
--- a/mariner/tests/testthat/_snaps/MergedGInteractions.md
+++ b/mariner/tests/testthat/_snaps/MergedGInteractions.md
@@ -4,6 +4,7 @@
.mapIds(x)
Output
seqnames1 start1 end1 width1 strand1 seqnames2 start2 end2
+ <fctr> <int> <int> <int> <fctr> <fctr> <int> <int>
1: chr9 118645000 118650000 5001 * chr9 119330000 119335000
2: chr9 118645000 118650000 5001 * chr9 119330000 119335000
3: chr17 80635000 80640000 5001 * chr17 80920000 80925000
@@ -12,16 +13,18 @@
6: chr9 14460000 14465000 5001 * chr9 14765000 14770000
7: chr17 47645000 47650000 5001 * chr17 48075000 48080000
8: chr17 47645000 47650000 5001 * chr17 48075000 48080000
- width2 strand2 color APScoreAvg ProbabilityofEnrichment RegAPScoreAvg
- 1: 5001 * 0,0,0 2.611034 0.9860443 1.414376
- 2: 5001 * 0,0,0 2.611034 0.9860443 1.414376
- 3: 5001 * 0,0,0 2.889573 0.9713564 1.379367
- 4: 5001 * 0,0,0 2.889573 0.9713564 1.379367
- 5: 5001 * 0,0,0 3.272132 0.9868535 2.233533
- 6: 5001 * 0,0,0 3.272132 0.9868535 2.233533
- 7: 5001 * 0,0,0 3.520431 0.9801694 2.433166
- 8: 5001 * 0,0,0 3.520431 0.9801694 2.433166
+ width2 strand2 color APScoreAvg ProbabilityofEnrichment RegAPScoreAvg
+ <int> <fctr> <char> <num> <num> <num>
+ 1: 5001 * 0,0,0 2.611034 0.9860443 1.414376
+ 2: 5001 * 0,0,0 2.611034 0.9860443 1.414376
+ 3: 5001 * 0,0,0 2.889573 0.9713564 1.379367
+ 4: 5001 * 0,0,0 2.889573 0.9713564 1.379367
+ 5: 5001 * 0,0,0 3.272132 0.9868535 2.233533
+ 6: 5001 * 0,0,0 3.272132 0.9868535 2.233533
+ 7: 5001 * 0,0,0 3.520431 0.9801694 2.433166
+ 8: 5001 * 0,0,0 3.520431 0.9801694 2.433166
Avg_diffMaxNeihgboor_1 Avg_diffMaxNeihgboor_2 avg std value
+ <num> <num> <num> <num> <num>
1: 1.8755854 2.121637 2.605124 0.7942202 4.272311
2: 1.8755854 2.121637 2.605124 0.7942202 4.272311
3: 1.9105295 1.946362 1.854944 0.6729783 3.553193
@@ -30,13 +33,14 @@
6: 1.0059373 1.645508 3.437883 0.5164226 4.332049
7: 0.8104557 1.486894 3.200528 0.6733462 3.920933
8: 0.8104557 1.486894 3.200528 0.6733462 3.920933
- src id grp clst i.id
- 1: FS 1 1 1 1
- 2: FS 5 1 1 1
- 3: FS 2 2 1 2
- 4: FS 6 2 1 2
- 5: WT 3 1 2 3
- 6: WT 7 1 2 3
- 7: WT 4 2 2 4
- 8: WT 8 2 2 4
+ src id grp clst i.id
+ <char> <int> <int> <int> <int>
+ 1: FS 1 1 1 1
+ 2: FS 5 1 1 1
+ 3: FS 2 2 1 2
+ 4: FS 6 2 1 2
+ 5: WT 3 1 2 3
+ 6: WT 7 1 2 3
+ 7: WT 4 2 2 4
+ 8: WT 8 2 2 4
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