blast+ 2.14.0 cannot be compiled under GCC 13 due to breaking changes. Upstream is notified. Upstream fixed the problem in 2.14.1.
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Package Details: blast+ 2.16.0-1
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Git Clone URL: | https://aur.archlinux.org/blast+.git (read-only, click to copy) |
---|---|
Package Base: | blast+ |
Description: | BLAST tool suite from NCBI (blastn, blastp, blastx, psiblast, etc) |
Upstream URL: | http://blast.ncbi.nlm.nih.gov/ |
Licenses: | custom |
Conflicts: | blast, blast+-bin, ncbi-blast, proj |
Provides: | blast |
Replaces: | ncbi-blast |
Submitter: | wookietreiber |
Maintainer: | mys_721tx |
Last Packager: | mys_721tx |
Votes: | 7 |
Popularity: | 0.000000 |
First Submitted: | 2015-07-07 11:11 (UTC) |
Last Updated: | 2024-07-19 06:07 (UTC) |
Dependencies (16)
- bzip2 (bzip2-gitAUR)
- db
- gcc-libs (gcc-libs-gitAUR, gccrs-libs-gitAUR, gcc11-libsAUR, gcc-libs-snapshotAUR)
- libelf (elfutils-gitAUR)
- libnghttp2 (libnghttp2-gitAUR)
- libuv (libuv-gitAUR)
- lmdb (lumosqlAUR, lmdb-gitAUR)
- lzo
- pcre
- perl (perl-gitAUR)
- python (python37AUR, python311AUR, python310AUR)
- sqlite (sqlite-fossilAUR)
- zlib (zlib-ng-compat-gitAUR, zlib-gitAUR, zlib-ng-compatAUR)
- zstd (zstd-gitAUR, zstd-staticAUR)
- cpio (cpio-gitAUR) (make)
- gcc (gcc-gitAUR, gccrs-gitAUR, gcc11AUR, gcc-snapshotAUR) (make)
Required by (10)
- amrfinderplus
- bio-tbtools (optional)
- diamond
- getorganelle
- hybpiper
- kraken2
- mitos
- ugene-bin (optional)
- ugene-git (optional)
- unicycler (optional)
Sources (1)
mys_721tx commented on 2023-06-19 06:27 (UTC) (edited on 2023-08-24 07:11 (UTC) by mys_721tx)
mys_721tx commented on 2022-11-25 18:46 (UTC)
@buggs Sorry for the late reply. -j
should be handled by MAKEFLAGS
, which is in /etc/makepkg.conf
.
buggs commented on 2022-10-28 16:48 (UTC)
Could you add -j to make so it uses all cores to build? make -j
stick commented on 2022-02-03 22:06 (UTC)
Welcome to the new maintainer @mys_721tx!
mys_721tx commented on 2022-02-03 22:04 (UTC)
I am happy to take over the maintenance if you wish.
stick commented on 2022-02-03 21:56 (UTC) (edited on 2022-02-03 21:56 (UTC) by stick)
@mys_721tx bumped (and conflicts updated), thanks!
mys_721tx commented on 2022-02-02 09:44 (UTC)
Bump for 2.12.0. The sha256sum is fda3c9c9d488cad6c1880a98a236d842bcf3610e3e702af61f7a48cf0a714b88
.
Also blast+ is in conflict with proj due to libproj.so
stick commented on 2019-05-10 01:38 (UTC)
@drno Thanks! Tested, approved, updated.
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