Package Details: fsl 6.0.7.16-1

Git Clone URL: https://aur.archlinux.org/fsl.git (read-only, click to copy)
Package Base: fsl
Description: A comprehensive library of analysis tools for FMRI, MRI and DTI brain imaging data
Upstream URL: http://www.fmrib.ox.ac.uk/fsl/
Licenses: custom
Submitter: fishburn
Maintainer: tobac
Last Packager: tobac
Votes: 12
Popularity: 0.000000
First Submitted: 2012-07-02 23:36 (UTC)
Last Updated: 2024-12-22 17:38 (UTC)

Dependencies (1)

Required by (4)

Sources (1)

Latest Comments

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jnvandermeer commented on 2017-03-13 07:11 (UTC)

Hi all, I also managed to get fslview working with instructions at: http://neuro.debian.net/blog/2011/2011-12-12_schroot_fslview.html. Only, unlike in these instructions, squeeze no longer works for me. It's been a while, so you'd have to use jessie now. fslview is actually in the basic repositories of Debian Stable. So... replace all instances of squeeze with jessie in the following instructions at: http://neuro.debian.net/blog/2011/2011-12-12_schroot_fslview.html I tried to build fslview.. but.. it just takes too long at the moment. I do get this warning about QGtkStyle could not resolve GTK, but I will ignore it.

reecestevens commented on 2015-02-03 23:11 (UTC)

Small maintenance note, it seems that FSL source has updated to 5.0.8. I was able to install simply by changing the version number to 5.0.8 in the PKGBUILD and disabling verification checks.The current PKGBUILD file is looking for the source link given above, which no longer exists. Thanks!

fishburn commented on 2014-06-12 01:21 (UTC)

@bobschi Thanks for continuing to look into this. If I'm understanding this correctly, they are suggesting to use a chroot of a Debian install that has all of the old libraries. Making such a pkgbuild is inconsistent with the arch way and is completely out of the question, IMO. That said, the chroot method might shine some light on how to get it to compile from source. I will take a look when I get some free time. Thanks again for following up.

bobschi commented on 2014-06-11 13:17 (UTC)

@cornholio This works for me: http://neuro.debian.net/blog/2011/2011-12-12_schroot_fslview.html First time starting I got an error, which could be fixed by commenting out "networks": https://bbs.archlinux.org/viewtopic.php?id=100039 Maybe you can put all this information together in a PKGBUILD?

fishburn commented on 2014-05-12 20:57 (UTC)

@bobschi Yes, I consulted that page extensively when trying to get it to compile. The code is so old I had difficulty just obtaining old enough versions of some of the dependencies. Let me know if you get it working and can point me in the right direction.

bobschi commented on 2014-05-12 09:37 (UTC)

@cornholio Thank you too. Did you have a look at this? http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FslInstallation/SourceCode/FslView#Preparing_a_build_environment

fishburn commented on 2014-05-10 00:21 (UTC)

@bobschi Thanks, I've updated fsl now. I have never been able to get fslview to compile. I even tried using a binary package from neurodebian but couldn't get that to work either.

bobschi commented on 2014-05-09 18:03 (UTC)

New version available: 5.0.6 As I installed this version today I saw, that fslview is missing. Any ideas?

neurignacio commented on 2013-10-22 02:56 (UTC)

new version available: 5.0.5 To install, modify PKGBUILD to newer version: pkgver=5.0.5 #md5sums=('b87889efb2b4a31842eca1bee97c8578') #http://fsl.fmrib.ox.ac.uk/fsl/cgi-bin/fslchecksums.pl sha1sums=('43f831d179d7714c616fd661f18783e7be34b7d0') #self-generated

fishburn commented on 2013-10-03 21:50 (UTC)

@virati I have not been able to get fslview to compile. The last time I checked, the versions of the dependencies were so outdated that I couldn't find them anywhere. If you can get it to compile, please feel free to post a modified PKGBUILD.

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